PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_1220g0010
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family bHLH
Protein Properties Length: 444aa    MW: 50469.4 Da    PI: 6.3089
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_1220g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.91.6e-12245292355
                   HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
           HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                   ++h   Er+RR+ +N++++ Lr+l+P++     +K++ a+i   A+ YIk+Lq
  MA_1220g0010 245 ANHFVTERQRREYLNDRYQILRSLIPNP-----TKVDRASIAGDAIVYIKELQ 292
                   68**************************.....9******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.83E-14241304IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.43242291IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.1E-9245292IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.72E-10246293No hitNo description
Gene3DG3DSA:4.10.280.101.3E-12246300IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.4E-9248297IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 444 aa     Download sequence    Send to blast
MGSEIQRQLN FELEQEYNTQ IMDDVLLLRR HEISTSEQQH RQHQQQQQAN WEANIHELYE  60
MSLFQSQHGG EQHPTITSFT SPCIYNNNTS IDHRAEPNGY NTGSANYLGP ELLNLLQLPA  120
VCSTESNSVS NRSSVSKTAT MFPTPNNEAS DSINCHHESV GLYDLHHEAQ LKNLFHMNTF  180
SHPSYQLSSP NPLFCRSNLE FDSSAETAAN MQQELGGEER QFGNSLMDFK REISLFKAGD  240
HGKGANHFVT ERQRREYLND RYQILRSLIP NPTKVDRASI AGDAIVYIKE LQRTIDELKA  300
LVVHKRSRSV RGISGKLRVD NSAADMESSC QQSCDQKDTN KFMTNESLRS SWLQRTSQYG  360
TEVDVRIVHD EVTIKVVKKK CPNFVLCMTT ILQELHLDIL HASGANIGDH HVFVFNTLIC  420
EGWNVYGESI AMKLIEALDR KPAL
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ7109990.0KJ710999.1 Pinus tabuliformis clone PtbHLH1 bHLH1 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0K0M7940.0A0A0K0M794_PINTB; BHLH1
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP26591431
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06170.22e-50bHLH family protein